STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA59255.1PFAM: Scaffold protein Nfu/NifU N terminal; PBS lyase HEAT-like repeat. (388 aa)    
Predicted Functional Partners:
efp
Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.
  
 0.971
AGA58791.1
PFAM: YugN-like family.
  
     0.743
AGA57917.1
PFAM: Dynamin family.
 
     0.723
AGA58830.1
Hypothetical protein.
  
     0.719
AGA56562.1
Hypothetical protein.
  
     0.718
AGA57993.1
Hypothetical protein.
  
     0.715
AGA58444.1
PFAM: Protein of unknown function (DUF2626).
  
     0.707
AGA57146.1
PFAM: Protein of unknown function (DUF1128).
  
     0.701
AGA59593.1
PFAM: YwhD family.
  
     0.695
AGA57720.1
Hypothetical protein.
  
     0.694
Your Current Organism:
Thermobacillus composti
NCBI taxonomy Id: 717605
Other names: T. composti KWC4, Thermobacillus composti DSM 18247, Thermobacillus composti KWC4, Thermobacillus composti str. KWC4, Thermobacillus composti strain KWC4, Thermobacillus sp. KWC4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.