STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA59593.1PFAM: YwhD family. (169 aa)    
Predicted Functional Partners:
AGA58138.1
Putative membrane protein; PFAM: Protein of unknown function (DUF964); Belongs to the UPF0342 family.
  
    0.763
AGA57541.1
PFAM: Protein of unknown function DUF86.
  
     0.756
AGA57146.1
PFAM: Protein of unknown function (DUF1128).
  
     0.738
AGA59594.1
Aminopeptidase N; PFAM: Peptidase family M1.
       0.726
AGA56820.1
PFAM: Protein of unknown function (DUF2621).
  
     0.710
AGA59595.1
Hypothetical protein.
       0.709
AGA58977.1
Hypothetical protein.
  
    0.696
AGA59255.1
PFAM: Scaffold protein Nfu/NifU N terminal; PBS lyase HEAT-like repeat.
  
     0.695
AGA58155.1
PFAM: ACT domain; Protein of unknown function (DUF3388).
  
     0.688
AGA57548.1
PFAM: Protein of unknown function (DUF1450).
 
     0.673
Your Current Organism:
Thermobacillus composti
NCBI taxonomy Id: 717605
Other names: T. composti KWC4, Thermobacillus composti DSM 18247, Thermobacillus composti KWC4, Thermobacillus composti str. KWC4, Thermobacillus composti strain KWC4, Thermobacillus sp. KWC4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.