Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AGA56396.1 | AGA58538.1 | Theco_0149 | Theco_2430 | Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein); PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit. | PFAM: GTPase of unknown function; TIGRFAM: ribosome biogenesis GTPase YqeH. | 0.685 |
| AGA56396.1 | AGA58827.1 | Theco_0149 | Theco_2738 | Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein); PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit. | PFAM: Primosomal protein DnaI N-terminus; IstB-like ATP binding protein. | 0.758 |
| AGA56396.1 | AGA59752.1 | Theco_0149 | Theco_3733 | Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein); PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit. | HD superfamily phosphohydrolase; PFAM: HD domain. | 0.525 |
| AGA56396.1 | nadK | Theco_0149 | Theco_0573 | Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein); PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit. | Putative sugar kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.648 |
| AGA56396.1 | rpoE | Theco_0149 | Theco_3544 | Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein); PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit. | DNA-directed RNA polymerase, delta subunit; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family. | 0.607 |
| AGA58314.1 | AGA59752.1 | Theco_2194 | Theco_3733 | Putative RNA-binding protein, snRNP like protein; PFAM: Domain of unknown function (DUF814); Fibronectin-binding protein A N-terminus (FbpA). | HD superfamily phosphohydrolase; PFAM: HD domain. | 0.475 |
| AGA58538.1 | AGA56396.1 | Theco_2430 | Theco_0149 | PFAM: GTPase of unknown function; TIGRFAM: ribosome biogenesis GTPase YqeH. | Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein); PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit. | 0.685 |
| AGA58538.1 | AGA58827.1 | Theco_2430 | Theco_2738 | PFAM: GTPase of unknown function; TIGRFAM: ribosome biogenesis GTPase YqeH. | PFAM: Primosomal protein DnaI N-terminus; IstB-like ATP binding protein. | 0.735 |
| AGA58538.1 | AGA59752.1 | Theco_2430 | Theco_3733 | PFAM: GTPase of unknown function; TIGRFAM: ribosome biogenesis GTPase YqeH. | HD superfamily phosphohydrolase; PFAM: HD domain. | 0.675 |
| AGA58538.1 | nadK | Theco_2430 | Theco_0573 | PFAM: GTPase of unknown function; TIGRFAM: ribosome biogenesis GTPase YqeH. | Putative sugar kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.556 |
| AGA58538.1 | rpoE | Theco_2430 | Theco_3544 | PFAM: GTPase of unknown function; TIGRFAM: ribosome biogenesis GTPase YqeH. | DNA-directed RNA polymerase, delta subunit; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family. | 0.760 |
| AGA58827.1 | AGA56396.1 | Theco_2738 | Theco_0149 | PFAM: Primosomal protein DnaI N-terminus; IstB-like ATP binding protein. | Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein); PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit. | 0.758 |
| AGA58827.1 | AGA58538.1 | Theco_2738 | Theco_2430 | PFAM: Primosomal protein DnaI N-terminus; IstB-like ATP binding protein. | PFAM: GTPase of unknown function; TIGRFAM: ribosome biogenesis GTPase YqeH. | 0.735 |
| AGA58827.1 | AGA59752.1 | Theco_2738 | Theco_3733 | PFAM: Primosomal protein DnaI N-terminus; IstB-like ATP binding protein. | HD superfamily phosphohydrolase; PFAM: HD domain. | 0.427 |
| AGA58827.1 | nadK | Theco_2738 | Theco_0573 | PFAM: Primosomal protein DnaI N-terminus; IstB-like ATP binding protein. | Putative sugar kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.471 |
| AGA58827.1 | rpoE | Theco_2738 | Theco_3544 | PFAM: Primosomal protein DnaI N-terminus; IstB-like ATP binding protein. | DNA-directed RNA polymerase, delta subunit; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family. | 0.602 |
| AGA59445.1 | AGA59752.1 | Theco_3398 | Theco_3733 | Hypothetical protein. | HD superfamily phosphohydrolase; PFAM: HD domain. | 0.535 |
| AGA59751.1 | AGA59752.1 | Theco_3732 | Theco_3733 | Hydrolase, TatD family; PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family. | HD superfamily phosphohydrolase; PFAM: HD domain. | 0.720 |
| AGA59751.1 | AGA59753.1 | Theco_3732 | Theco_3734 | Hydrolase, TatD family; PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family. | PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family. | 0.401 |
| AGA59752.1 | AGA56396.1 | Theco_3733 | Theco_0149 | HD superfamily phosphohydrolase; PFAM: HD domain. | Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein); PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit. | 0.525 |
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