STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFM12095.1PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: pjd:Pjdr2_2636 ribosomal RNA methyltransferase RrmJ/FtsJ. (349 aa)    
Predicted Functional Partners:
EFM12093.1
KEGG: pjd:Pjdr2_2635 hypothetical protein.
 
     0.863
EFM12094.1
KEGG: gym:GYMC10_2379 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase.
       0.806
EFM12090.1
HAD-superfamily hydrolase, subfamily IIA; Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro; Belongs to the HAD-like hydrolase superfamily. NagD family.
 
     0.758
EFM12091.1
KEGG: pjd:Pjdr2_2633 DNA-(apurinic or apyrimidinic site) lyase; PFAM: Formamidopyrimidine-DNA glycosylase catalytic domain protein; DNA glycosylase/AP lyase, H2TH DNA-binding; Belongs to the FPG family.
       0.757
EFM12092.1
TIGRFAM: apurinic endonuclease Apn1; PFAM: Xylose isomerase domain protein TIM barrel; KEGG: pjd:Pjdr2_2634 apurinic endonuclease Apn1; SMART: AP endonuclease family 2.
       0.757
EFM09993.1
PFAM: Abortive infection protein; KEGG: pjd:Pjdr2_4815 abortive infection protein.
 
     0.746
EFM10121.1
PFAM: protein of unknown function DUF423; KEGG: pjd:Pjdr2_4626 protein of unknown function DUF423.
 
  
 0.674
EFM09908.1
KEGG: pjd:Pjdr2_3328 copper amine oxidase domain protein; PFAM: copper amine oxidase domain protein; PKD domain containing protein; SMART: PKD domain containing protein.
  
     0.663
EFM12096.1
KEGG: pjd:Pjdr2_2637 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain.
       0.658
EFM12087.1
KEGG: bbe:BBR47_50510 putative helicase; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; Protein of unknown function DUF1998; SMART: DEAD-like helicase; helicase domain protein.
       0.634
Your Current Organism:
Paenibacillus curdlanolyticus
NCBI taxonomy Id: 717606
Other names: P. curdlanolyticus YK9, Paenibacillus curdlanolyticus ATCC 51898, Paenibacillus curdlanolyticus DSM 10247, Paenibacillus curdlanolyticus IFO 15724, Paenibacillus curdlanolyticus NBRC 15724, Paenibacillus curdlanolyticus YK9, Paenibacillus curdlanolyticus str. YK9, Paenibacillus curdlanolyticus strain YK9
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.