STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFM10906.1TIGRFAM: cobalt ABC transporter, ATPase subunit; cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: ABC transporter related; cobalt transport protein; KEGG: dae:Dtox_1151 cobalt ABC transporter, ATPase subunit; SMART: AAA ATPase. (545 aa)    
Predicted Functional Partners:
EFM10908.1
PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; KEGG: pth:PTH_1959 ABC-type Co2+ transport system, permease component.
 
 0.985
EFM12257.1
KEGG: bbe:BBR47_49320 cobalt ABC transporter permease protein; TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein.
 
 0.977
EFM13147.1
KEGG: pjd:Pjdr2_3365 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
0.971
EFM10907.1
KEGG: dae:Dtox_1149 hypothetical protein.
 
 0.971
EFM13148.1
KEGG: pjd:Pjdr2_3364 ABC transporter related; PFAM: ABC transporter related; cobalt transport protein; SMART: AAA ATPase.
 
0.970
cbiM
Cobalamin biosynthesis protein CbiM; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.
 
 0.917
EFM13146.1
PFAM: BioY protein; KEGG: pjd:Pjdr2_3366 BioY protein.
   
 0.900
cbiN
Cobalt transport protein CbiN; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import; Belongs to the CbiN family.
 
 
 0.719
EFM11731.1
Sulfate ABC transporter, ATPase subunit; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Sulfate/tungstate importer (TC 3.A.1.6) family.
 
  
 
0.640
EFM12247.1
TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; KEGG: bbe:BBR47_12500 CbiET protein; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase.
  
 
 0.618
Your Current Organism:
Paenibacillus curdlanolyticus
NCBI taxonomy Id: 717606
Other names: P. curdlanolyticus YK9, Paenibacillus curdlanolyticus ATCC 51898, Paenibacillus curdlanolyticus DSM 10247, Paenibacillus curdlanolyticus IFO 15724, Paenibacillus curdlanolyticus NBRC 15724, Paenibacillus curdlanolyticus YK9, Paenibacillus curdlanolyticus str. YK9, Paenibacillus curdlanolyticus strain YK9
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