STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFM09060.1KEGG: pjd:Pjdr2_5799 efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (516 aa)    
Predicted Functional Partners:
EFM09058.1
PFAM: protein of unknown function DUF214; KEGG: pjd:Pjdr2_5797 protein of unknown function DUF214.
 
  
 0.986
EFM09110.1
KEGG: bha:BH3611 hypothetical protein.
  
 0.983
EFM09059.1
KEGG: pjd:Pjdr2_5798 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 
 0.948
EFM11215.1
PFAM: protein of unknown function DUF214; KEGG: gym:GYMC10_6134 protein of unknown function DUF214.
  
  
 0.764
EFM11157.1
PFAM: protein of unknown function DUF214; KEGG: pjd:Pjdr2_6051 protein of unknown function DUF214.
  
  
 0.764
hisI
KEGG: pjd:Pjdr2_0165 phosphoribosyl-ATP diphosphatase; TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: phosphoribosyl-AMP cyclohydrolase; Phosphoribosyl-ATP pyrophosphohydrolase-like; In the N-terminal section; belongs to the PRA-CH family.
  
    0.730
EFM12855.1
TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: pjd:Pjdr2_3856 efflux transporter, RND family, MFP subunit.
 
 
0.695
EFM13154.1
PFAM: acriflavin resistance protein; KEGG: pjd:Pjdr2_2129 acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  
 0.578
EFM12885.1
PFAM: acriflavin resistance protein; KEGG: pjd:Pjdr2_3814 acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  
 0.574
EFM12857.1
KEGG: pjd:Pjdr2_3854 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 
 0.566
Your Current Organism:
Paenibacillus curdlanolyticus
NCBI taxonomy Id: 717606
Other names: P. curdlanolyticus YK9, Paenibacillus curdlanolyticus ATCC 51898, Paenibacillus curdlanolyticus DSM 10247, Paenibacillus curdlanolyticus IFO 15724, Paenibacillus curdlanolyticus NBRC 15724, Paenibacillus curdlanolyticus YK9, Paenibacillus curdlanolyticus str. YK9, Paenibacillus curdlanolyticus strain YK9
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