STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M2NDW3_BAUPARAI1 domain-containing protein. (399 aa)    
Predicted Functional Partners:
M2MRH3_BAUPA
CID domain-containing protein.
    
 
 0.976
M2NNT6_BAUPA
RNase_PH domain-containing protein.
   
   0.945
M2M013_BAUPA
CLP1_P domain-containing protein.
   
 
 0.518
M2N2Z2_BAUPA
Uncharacterized protein.
   
 
 0.461
M2N7Q7_BAUPA
mRNA cap 0 methyltransferase domain-containing protein.
    
 
 0.461
M2NAD0_BAUPA
S4 RNA-binding domain-containing protein.
   
 
 0.413
Your Current Organism:
Baudoinia panamericana
NCBI taxonomy Id: 717646
Other names: B. panamericana UAMH 10762, Baudoinia compniacensis UAMH 10762, Baudoinia panamericana UAMH 10762
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