Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AHF00720.1Sensory histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (551 aa)    
Predicted Functional Partners:
AHF00357.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.990
AHF02166.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
0.990
AHF00735.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.990
AHF02059.1
Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.990
AHF02066.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.990
AHF02402.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
0.990
AHF02403.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
0.990
AHF02363.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.989
AHF02070.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.989
AHF02114.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.989
Your Current Organism:
Thiomicrospira aerophila
NCBI taxonomy Id: 717772
Other names: T. aerophila AL3, Thioalkalimicrobium aerophilum AL3, Thiomicrospira aerophila AL3
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