STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ89471.1PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: mmw:Mmwyl1_0095 short-chain dehydrogenase/reductase SDR; SMART: Polyketide synthase/Fatty acid synthase, KR. (249 aa)    
Predicted Functional Partners:
ADZ90231.1
Amino acid adenylation domain protein; SMART: Polyketide synthase, phosphopantetheine-binding; TIGRFAM: Amino acid adenylation; KEGG: pfs:PFLU3223 putative non-ribosomal peptide synthetase; PFAM: AMP-dependent synthetase/ligase; Condensation domain; Phosphopantetheine-binding.
  
 
 0.850
ADZ90229.1
PFAM: AMP-dependent synthetase/ligase; Phosphopantetheine-binding; KEGG: ava:Ava_4108 beta-ketoacyl synthase; SMART: Polyketide synthase, phosphopantetheine-binding.
  
 
 0.783
ADZ93187.1
PFAM: Ferredoxin; KEGG: mmw:Mmwyl1_4192 ferredoxin.
  
 
 0.744
ADZ91737.1
KEGG: mmw:Mmwyl1_2598 caffeoyl-CoA O-methyltransferase; PFAM: O-methyltransferase, family 3.
 
  
 
 0.722
ADZ90915.1
Alcohol dehydrogenase zinc-binding domain protein; PFAM: Alcohol dehydrogenase, C-terminal; KEGG: mlo:mll7199 3-alpha-hydroxysteroid dehydrogenase.
  
     0.687
ADZ91256.1
SMART: Polyketide synthase, acyl transferase domain; TIGRFAM: Malonyl CoA-acyl carrier protein transacylase; KEGG: mmw:Mmwyl1_2131 malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase.
 
 0.581
ADZ90130.1
PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: mmw:Mmwyl1_0504 3-alpha-hydroxysteroid dehydrogenase.
  
     0.506
ADZ93126.1
TIGRFAM: Choline-sulfatase; KEGG: hel:HELO_1581 choline-sulfatase; PFAM: Sulfatase.
   
 
 0.493
ADZ91250.1
PFAM: MaoC-like dehydratase; KEGG: mmw:Mmwyl1_2239 dehydratase.
 
 0.486
ADZ89472.1
Regulatory protein MarR; KEGG: mmw:Mmwyl1_0096 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR.
       0.475
Your Current Organism:
Marinomonas mediterranea
NCBI taxonomy Id: 717774
Other names: M. mediterranea MMB-1, Marinomonas mediterranea MMB-1, Marinomonas mediterranea str. MMB-1, Marinomonas mediterranea strain MMB-1
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