STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ89509.1KEGG: ppr:PBPRB1497 hypothetical protein. (174 aa)    
Predicted Functional Partners:
ADZ89508.1
KEGG: ppr:PBPRB1498 hypothetical protein.
       0.773
ADZ89510.1
PFAM: Uncharacterised protein family HutD; KEGG: mmw:Mmwyl1_3904 hypothetical protein.
       0.517
ADZ89507.1
Abi family protein; PFAM: Abortive infection bacteriophage resistance-related; KEGG: shm:Shewmr7_2861 Abi family protein.
       0.480
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
       0.403
ADZ89511.1
PFAM: YHS; KEGG: vsp:VS_2795 hypothetical protein.
       0.400
Your Current Organism:
Marinomonas mediterranea
NCBI taxonomy Id: 717774
Other names: M. mediterranea MMB-1, Marinomonas mediterranea MMB-1, Marinomonas mediterranea str. MMB-1, Marinomonas mediterranea strain MMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.