STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
katGCatalase-peroxidase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily. (742 aa)    
Predicted Functional Partners:
hisC
PFAM: Aminotransferase, class I/classII; TIGRFAM: Histidinol-phosphate aminotransferase; HAMAP: Histidinol-phosphate aminotransferase; KEGG: mmw:Mmwyl1_1133 histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
     
 0.902
katG-2
Catalase-peroxidase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily.
  
  
 
0.902
ADZ92547.1
Aspartate transaminase; KEGG: mmw:Mmwyl1_3552 aromatic amino acid aminotransferase; PFAM: Aminotransferase, class I/classII.
     
 0.902
ADZ93380.1
Aspartate transaminase; KEGG: mmw:Mmwyl1_4445 aromatic amino acid aminotransferase; PFAM: Aminotransferase, class I/classII.
     
 0.902
ADZ92722.1
Kynureninase; KEGG: pha:PSHAa0055 pyridoxal phosphate dependent enzyme; PFAM: Aminotransferase, class V/Cysteine desulfurase.
     
  0.900
ADZ90732.1
Chorismate mutase; TIGRFAM: Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain; PFAM: Prephenate dehydratase; Chorismate mutase, type II; Amino acid-binding ACT; KEGG: mmw:Mmwyl1_2858 chorismate mutase; SMART: Chorismate mutase.
     
  0.800
ADZ92334.1
KEGG: mmw:Mmwyl1_3003 prephenate dehydratase; PFAM: Prephenate dehydratase.
     
  0.800
ADZ91209.1
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
    
 0.582
ADZ92373.1
KEGG: mmw:Mmwyl1_1415 superoxide dismutase Ni-type; TIGRFAM: Superoxide dismutase, Nickel-type; PFAM: Superoxide dismutase, Nickel-type.
     
 0.527
ADZ89521.1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: kko:Kkor_0142 transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
       0.493
Your Current Organism:
Marinomonas mediterranea
NCBI taxonomy Id: 717774
Other names: M. mediterranea MMB-1, Marinomonas mediterranea MMB-1, Marinomonas mediterranea str. MMB-1, Marinomonas mediterranea strain MMB-1
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