STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ89665.1Protein of unknown function DUF6 transmembrane; PFAM: Drug/metabolite transporter; KEGG: vvy:VVA0216 hypothetical protein. (319 aa)    
Predicted Functional Partners:
ADZ89664.1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: vvu:VV2_1382 transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
    0.523
ADZ89666.1
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: stp:Strop_1957 glyoxalase/bleomycin resistance protein/dioxygenase.
       0.488
ADZ89663.1
PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding; KEGG: mmw:Mmwyl1_4063 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
    0.484
ADZ92478.1
Protein of unknown function DUF6 transmembrane; PFAM: Drug/metabolite transporter; KEGG: mmw:Mmwyl1_3468 hypothetical protein.
  
     0.416
Your Current Organism:
Marinomonas mediterranea
NCBI taxonomy Id: 717774
Other names: M. mediterranea MMB-1, Marinomonas mediterranea MMB-1, Marinomonas mediterranea str. MMB-1, Marinomonas mediterranea strain MMB-1
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