STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ89874.1PFAM: Protein of unknown function DUF501; KEGG: mmw:Mmwyl1_3951 hypothetical protein. (173 aa)    
Predicted Functional Partners:
ADZ92297.1
KEGG: mmw:Mmwyl1_2966 alpha/beta hydrolase.
  
     0.704
ADZ89875.1
KEGG: mmw:Mmwyl1_3950 TonB-like protein.
       0.664
ADZ92513.1
KEGG: mmw:Mmwyl1_3497 beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase, C-terminal; Beta-ketoacyl synthase, N-terminal; SMART: Polyketide synthase, beta-ketoacyl synthase domain; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
     0.664
ADZ89939.1
Fertility inhibition FinO-like protein; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family.
  
     0.517
ADZ90410.1
KEGG: mmw:Mmwyl1_1264 hypothetical protein.
  
     0.431
dapD
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2-amino-6-oxopimelate using succinyl-CoA.
  
     0.428
ADZ91406.1
yecA family protein; TIGRFAM: Uncharacterised protein family UPF0149; KEGG: mmw:Mmwyl1_2227 YecA family protein; Belongs to the UPF0149 family.
  
     0.417
ADZ92677.1
KEGG: mmw:Mmwyl1_3990 Ppx/GppA phosphatase; PFAM: Ppx/GppA phosphatase; Belongs to the GppA/Ppx family.
 
    0.415
ADZ91024.1
Ribonuclease, Rne/Rng family; TIGRFAM: Ribonuclease E/G; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; Ribosomal protein S1, RNA-binding domain; KEGG: mmw:Mmwyl1_1941 ribonuclease; SMART: RNA-binding domain, S1.
  
     0.400
Your Current Organism:
Marinomonas mediterranea
NCBI taxonomy Id: 717774
Other names: M. mediterranea MMB-1, Marinomonas mediterranea MMB-1, Marinomonas mediterranea str. MMB-1, Marinomonas mediterranea strain MMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.