STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ89943.1KEGG: mmw:Mmwyl1_3786 hypothetical protein. (405 aa)    
Predicted Functional Partners:
ADZ89944.1
PFAM: Protein of unknown function DUF400; KEGG: mmw:Mmwyl1_3785 hypothetical protein.
 
   
 0.962
ADZ92423.1
KEGG: mmw:Mmwyl1_3418 hypothetical protein.
 
     0.752
ADZ92452.1
PFAM: Flagellar assembly protein FliH/Type III secretion system HrpE; KEGG: mmw:Mmwyl1_3446 flagellar assembly protein FliH.
  
     0.730
ADZ89900.1
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
  
 
   0.720
ADZ92425.1
KEGG: mmw:Mmwyl1_3420 CheW domain-containing protein; PFAM: CheW-like protein; SMART: CheW-like protein.
  
     0.710
ADZ92297.1
KEGG: mmw:Mmwyl1_2966 alpha/beta hydrolase.
  
     0.702
ADZ89756.1
PFAM: Heat shock protein DnaJ, N-terminal; KEGG: mmw:Mmwyl1_4084 heat shock protein DnaJ domain-containing protein.
  
     0.677
ADZ89897.1
WD40 repeat-containing protein; PFAM: WD40 repeat, subgroup; KEGG: mmw:Mmwyl1_0763 WD-40 repeat-containing protein.
  
     0.669
ADZ92457.1
KEGG: mmw:Mmwyl1_3451 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAS.
  
     0.652
ADZ92431.1
Chemotaxis phosphatase, CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P).
  
   
 0.636
Your Current Organism:
Marinomonas mediterranea
NCBI taxonomy Id: 717774
Other names: M. mediterranea MMB-1, Marinomonas mediterranea MMB-1, Marinomonas mediterranea str. MMB-1, Marinomonas mediterranea strain MMB-1
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