STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ90263.1KEGG: pag:PLES_19581 general secretion pathway protein F; TIGRFAM: General secretion pathway protein F; PFAM: Type II secretion system F domain. (400 aa)    
Predicted Functional Partners:
ADZ90262.1
General secretory pathway protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
 0.986
ADZ90264.1
KEGG: maq:Maqu_1351 general secretion pathway protein G; TIGRFAM: General secretion pathway protein G; Prepilin-type cleavage/methylation, N-terminal; PFAM: Type II secretion system protein G; Prepilin-type cleavage/methylation, N-terminal.
 
  
 0.982
ADZ91282.1
PFAM: Type II secretion system protein E; KEGG: mmw:Mmwyl1_2313 type II secretion system protein E.
 
 0.955
ADZ90266.1
TIGRFAM: General secretion pathway protein I; Prepilin-type cleavage/methylation, N-terminal; KEGG: slt:Slit_0494 general secretion pathway protein I.
  
  
 0.912
ADZ91280.1
Prepilin peptidase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
  
 0.906
ADZ90265.1
Hypothetical protein; KEGG: sfr:Sfri_0109 general secretion pathway protein H.
  
  
 0.902
ADZ90267.1
TIGRFAM: General secretion pathway protein J; Prepilin-type cleavage/methylation, N-terminal; KEGG: pag:PLES_19621 general secretion pathway protein J.
 
  
 0.897
ADZ90268.1
Hypothetical protein; KEGG: slt:Slit_0492 general secretion pathway protein K.
 
   
 0.879
ADZ92586.1
KEGG: maq:Maqu_2027 general secretion pathway protein D; TIGRFAM: Type II secretion system GspD; PFAM: Type II/III secretion system; NolW-like.
 
  
 0.846
ADZ92850.1
Putative PAS/PAC sensor protein; KEGG: rcu:RCOM_0232140 two-component system sensor histidine kinase/response regulator, putative; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; PAS.
  
 
 0.843
Your Current Organism:
Marinomonas mediterranea
NCBI taxonomy Id: 717774
Other names: M. mediterranea MMB-1, Marinomonas mediterranea MMB-1, Marinomonas mediterranea str. MMB-1, Marinomonas mediterranea strain MMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.