STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
apaHBis(5'-nucleosyl)-tetraphosphatase, symmetrical; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family. (270 aa)    
Predicted Functional Partners:
ADZ92253.1
PFAM: Ankyrin repeat; KEGG: ddc:Dd586_1276 ankyrin.
   
 0.938
apaG
Protein ApaG; KEGG: mmw:Mmwyl1_1050 ApaG; HAMAP: Uncharacterised protein family ApaG; PFAM: ApaG domain.
  
  
 0.930
ADZ91986.1
Hypothetical protein; KEGG: mgm:Mmc1_3184 calcium-binding EF-hand-containing protein.
    
 0.919
rsmA
Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.
  
  
 0.836
pdxA
4-hydroxythreonine-4-phosphate dehydrogenase; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP).
  
  
 0.796
ADZ90289.1
tRNA cytidylyltransferase; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate.
 
  
 0.786
ADZ90493.1
TIGRFAM: Small GTP-binding protein; PFAM: Ras; KEGG: pat:Patl_3991 small GTP-binding protein; SMART: Ras small GTPase, Rab type; Ras small GTPase, Ras type; Small GTPase, Rho type.
   
 0.742
ADZ89933.1
KEGG: mmw:Mmwyl1_0844 FKBP-type peptidylprolyl isomerase; PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal; Peptidyl-prolyl cis-trans isomerase, FKBP-type.
    
 
 0.730
ADZ90605.1
PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type; Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal; KEGG: mmw:Mmwyl1_3273 FKBP-type peptidylprolyl isomerase.
    
 
 0.730
ADZ90885.1
KEGG: mmw:Mmwyl1_0123 beta-lactamase-like protein; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like.
   
 
 0.727
Your Current Organism:
Marinomonas mediterranea
NCBI taxonomy Id: 717774
Other names: M. mediterranea MMB-1, Marinomonas mediterranea MMB-1, Marinomonas mediterranea str. MMB-1, Marinomonas mediterranea strain MMB-1
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.