STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ90329.1PFAM: FAD dependent oxidoreductase; KEGG: mmw:Mmwyl1_1154 hypothetical protein. (336 aa)    
Predicted Functional Partners:
ADZ90328.1
PFAM: Domain of unknown function DUF523; Domain of unknown function DUF1722; KEGG: mmw:Mmwyl1_1153 hypothetical protein.
       0.748
ADZ90327.1
KEGG: mmw:Mmwyl1_1152 deoxyribodipyrimidine photo-lyase; PFAM: DNA photolyase, FAD-binding/Cryptochrome, C-terminal; DNA photolyase, N-terminal.
 
     0.688
ADZ90330.1
KEGG: mmw:Mmwyl1_1155 MerR family transcriptional regulator; PFAM: HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR.
       0.597
ADZ90195.1
KEGG: mmw:Mmwyl1_0930 oxidoreductase, short-chain dehydrogenase/reductase family protein.
  
     0.581
ADZ89777.1
KEGG: mmw:Mmwyl1_4067 putative lipoprotein.
 
     0.529
ADZ90326.1
Regulatory protein MarR; KEGG: mmw:Mmwyl1_1151 transcriptional regulator TrmB; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR.
       0.411
ADZ90196.1
PFAM: Putative thiol-disulphide oxidoreductase DCC; KEGG: pat:Patl_4062 putative thiol-disulphide oxidoreductase DCC.
 
     0.408
ADZ89770.1
KEGG: mmw:Mmwyl1_4074 hypothetical protein.
 
     0.407
Your Current Organism:
Marinomonas mediterranea
NCBI taxonomy Id: 717774
Other names: M. mediterranea MMB-1, Marinomonas mediterranea MMB-1, Marinomonas mediterranea str. MMB-1, Marinomonas mediterranea strain MMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.