STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ90360.1HrpZ family protein; PFAM: Harpin, HrpN/Z; KEGG: eay:EAM_2877 harpin. (336 aa)    
Predicted Functional Partners:
ADZ90359.1
KEGG: ddd:Dda3937_03344 Hrp pili protein HrpA.
       0.529
ADZ90361.1
TIGRFAM: Type III secretion system, YscI/HrpB; KEGG: ddc:Dd586_1895 type III secretion apparatus protein, YscI/HrpB family.
       0.490
ADZ90362.1
Type III secretion apparatus lipoprotein, YscJ/HrcJ family; KEGG: eay:EAM_2885 type III secretion system protein; TIGRFAM: Type III secretion system lipoprotein HrcJ/YscJ; PFAM: Secretory protein YscJ/FliF.
       0.473
ADZ90363.1
KEGG: pmy:Pmen_0027 hypothetical protein.
       0.472
ADZ90364.1
Hypothetical protein; KEGG: epy:EpC_30770 hrp/hrc type III secretion system-Hrp/hrc secretion/translocation pathway-HrpE protein.
       0.468
Your Current Organism:
Marinomonas mediterranea
NCBI taxonomy Id: 717774
Other names: M. mediterranea MMB-1, Marinomonas mediterranea MMB-1, Marinomonas mediterranea str. MMB-1, Marinomonas mediterranea strain MMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.