STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ90503.1PFAM: Protein of unknown function DUF2496, YbaM-related; KEGG: sdy:SDY_0453 hypothetical protein. (53 aa)    
Predicted Functional Partners:
ADZ90231.1
Amino acid adenylation domain protein; SMART: Polyketide synthase, phosphopantetheine-binding; TIGRFAM: Amino acid adenylation; KEGG: pfs:PFLU3223 putative non-ribosomal peptide synthetase; PFAM: AMP-dependent synthetase/ligase; Condensation domain; Phosphopantetheine-binding.
     
 0.669
ADZ90229.1
PFAM: AMP-dependent synthetase/ligase; Phosphopantetheine-binding; KEGG: ava:Ava_4108 beta-ketoacyl synthase; SMART: Polyketide synthase, phosphopantetheine-binding.
     
 0.584
tpm
KEGG: mmw:Mmwyl1_1365 thiopurine S-methyltransferase; PFAM: Thiopurine S-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. TPMT family.
       0.538
ADZ90233.1
Amino acid adenylation domain protein; SMART: Polyketide synthase, phosphopantetheine-binding; TIGRFAM: Amino acid adenylation; KEGG: nde:NIDE2162 putative multi-domain non-ribosomal peptide synthetase; PFAM: AMP-dependent synthetase/ligase; Phosphopantetheine-binding.
     
 0.475
ADZ89319.1
Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
      
 0.410
Your Current Organism:
Marinomonas mediterranea
NCBI taxonomy Id: 717774
Other names: M. mediterranea MMB-1, Marinomonas mediterranea MMB-1, Marinomonas mediterranea str. MMB-1, Marinomonas mediterranea strain MMB-1
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