STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ90661.1Metallophosphoesterase; PFAM: Metallo-dependent phosphatase; KEGG: mmw:Mmwyl1_0159 metallophosphoesterase. (443 aa)    
Predicted Functional Partners:
ADZ92253.1
PFAM: Ankyrin repeat; KEGG: ddc:Dd586_1276 ankyrin.
   
 0.937
ADZ91986.1
Hypothetical protein; KEGG: mgm:Mmc1_3184 calcium-binding EF-hand-containing protein.
    
 0.919
ADZ90662.1
KEGG: mmw:Mmwyl1_0160 hypothetical protein.
       0.803
ADZ90493.1
TIGRFAM: Small GTP-binding protein; PFAM: Ras; KEGG: pat:Patl_3991 small GTP-binding protein; SMART: Ras small GTPase, Rab type; Ras small GTPase, Ras type; Small GTPase, Rho type.
   
 0.742
apaG
Protein ApaG; KEGG: mmw:Mmwyl1_1050 ApaG; HAMAP: Uncharacterised protein family ApaG; PFAM: ApaG domain.
  
  
 0.735
ADZ89933.1
KEGG: mmw:Mmwyl1_0844 FKBP-type peptidylprolyl isomerase; PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal; Peptidyl-prolyl cis-trans isomerase, FKBP-type.
    
 
 0.730
ADZ90605.1
PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type; Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal; KEGG: mmw:Mmwyl1_3273 FKBP-type peptidylprolyl isomerase.
    
 
 0.730
ADZ90885.1
KEGG: mmw:Mmwyl1_0123 beta-lactamase-like protein; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like.
   
 
 0.727
ADZ90660.1
KEGG: pin:Ping_2320 phosphoglycerate mutase; PFAM: Histidine phosphatase superfamily, clade-1; SMART: Histidine phosphatase superfamily, clade-1.
  
   0.720
rapA
SNF2-related protein; Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair; Belongs to the SNF2/RAD54 helicase family. RapA subfamily.
    
 
 0.690
Your Current Organism:
Marinomonas mediterranea
NCBI taxonomy Id: 717774
Other names: M. mediterranea MMB-1, Marinomonas mediterranea MMB-1, Marinomonas mediterranea str. MMB-1, Marinomonas mediterranea strain MMB-1
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