STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ90679.1Regulatory protein MarR; KEGG: dap:Dacet_0877 transcriptional regulator, MarR family; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR. (147 aa)    
Predicted Functional Partners:
ADZ90680.1
KEGG: swd:Swoo_1104 putative lipoprotein.
 
     0.886
ADZ89417.1
Helix-turn-helix domain protein; KEGG: sil:SPO2216 DNA-binding protein, putative; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3.
  
 
 
 0.509
ADZ93301.1
Ig family protein; PFAM: Putative Ig; KEGG: mmw:Mmwyl1_0296 Ig family protein.
  
     0.500
ADZ90834.1
Transcriptional regulator, AraC family; KEGG: mmw:Mmwyl1_0345 helix-turn-helix domain-containing protein; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain.
  
     0.481
ADZ93313.1
PFAM: Signal transduction response regulator, receiver domain; KEGG: mmw:Mmwyl1_0308 response regulator receiver protein.
  
     0.471
ADZ93370.1
KEGG: cyn:Cyan7425_0791 ATP-binding region ATPase domain protein; PFAM: ATPase-like, ATP-binding domain; Serine/threonine-protein kinase-like domain; GAF; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; Signal transduction response regulator, receiver domain; SMART: ATPase-like, ATP-binding domain; Serine/threonine-protein kinase domain; Tyrosine-protein kinase, catalytic domain; GAF; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; Signal transduction response regulator, receiver domain.
  
 
 0.469
ADZ93309.1
PFAM: Peptidase A24A, prepilin type IV; KEGG: mmw:Mmwyl1_0304 peptidase A24A prepilin type IV.
  
     0.420
Your Current Organism:
Marinomonas mediterranea
NCBI taxonomy Id: 717774
Other names: M. mediterranea MMB-1, Marinomonas mediterranea MMB-1, Marinomonas mediterranea str. MMB-1, Marinomonas mediterranea strain MMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.