STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ90868.1PFAM: Peptidase S58, DmpA; KEGG: csa:Csal_1047 aminopeptidase DmpA. (365 aa)    
Predicted Functional Partners:
ADZ90863.1
PFAM: Helix-turn-helix protein RpiR; KEGG: rcp:RCAP_rcc01387 RpiR family transcriptional regulator.
 
    0.752
ADZ90867.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: oan:Oant_2805 ornithine carbamoyltransferase.
       0.693
ADZ90866.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: rcp:RCAP_rcc01390 polyamine ABC transporter permease PotB.
       0.682
potA
Spermidine/putrescine ABC transporter ATPase subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
       0.661
ADZ90864.1
Extracellular solute-binding protein family 1; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
 
     0.560
ADZ90869.1
KEGG: vsa:VSAL_II0413 hypothetical protein.
       0.464
ADZ90870.1
KEGG: vsa:VSAL_II0414 hypothetical protein.
       0.464
ADZ90871.1
Hypothetical protein.
       0.464
ADZ92392.1
PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: azo:azo3710 acetyltransferase.
  
    0.440
ADZ91368.1
PFAM: Amidohydrolase 1; KEGG: jan:Jann_2275 amidohydrolase.
 
     0.435
Your Current Organism:
Marinomonas mediterranea
NCBI taxonomy Id: 717774
Other names: M. mediterranea MMB-1, Marinomonas mediterranea MMB-1, Marinomonas mediterranea str. MMB-1, Marinomonas mediterranea strain MMB-1
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