STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ90885.1KEGG: mmw:Mmwyl1_0123 beta-lactamase-like protein; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like. (365 aa)    
Predicted Functional Partners:
ADZ90883.1
KEGG: mmw:Mmwyl1_0125 hypothetical protein.
 
     0.958
ADZ90887.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: mmw:Mmwyl1_0121 binding-protein-dependent transporter inner membrane component.
 
    0.954
gpmI
2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
   
 0.939
ADZ89897.1
WD40 repeat-containing protein; PFAM: WD40 repeat, subgroup; KEGG: mmw:Mmwyl1_0763 WD-40 repeat-containing protein.
    
 0.935
ADZ90805.1
KEGG: shl:Shal_1317 SH3 domain-containing protein; PFAM: Variant SH3; SMART: Src homology-3 domain.
    
 0.935
ADZ90888.1
PFAM: Bacterial extracellular solute-binding, family 1; KEGG: mmw:Mmwyl1_0120 extracellular solute-binding protein.
 
   
 0.933
ADZ90884.1
KEGG: mmw:Mmwyl1_0124 phosphoglycerate mutase; PFAM: Histidine phosphatase superfamily, clade-1; SMART: Histidine phosphatase superfamily, clade-1.
 
     0.862
ADZ90886.1
Polyamine-transporting ATPase; PFAM: ABC transporter-like; Transport-associated OB, type 2; KEGG: mmw:Mmwyl1_0122 ABC transporter-like protein; SMART: ATPase, AAA+ type, core; Belongs to the ABC transporter superfamily.
 
    0.848
ADZ91285.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
  
    0.834
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
  0.815
Your Current Organism:
Marinomonas mediterranea
NCBI taxonomy Id: 717774
Other names: M. mediterranea MMB-1, Marinomonas mediterranea MMB-1, Marinomonas mediterranea str. MMB-1, Marinomonas mediterranea strain MMB-1
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