STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ90998.1Cysteine desulfurase; KEGG: mmw:Mmwyl1_1443 class V aminotransferase; PFAM: Aminotransferase, class V/Cysteine desulfurase. (542 aa)    
Predicted Functional Partners:
ttcA
tRNA 2-thiocytidine biosynthesis protein TtcA; Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine/cysteine desulfurase (IscS) system.
     0.919
ADZ90484.1
TIGRFAM: ATPase SufC, SUF system FeS cluster assembly; PFAM: ABC transporter-like; KEGG: mmw:Mmwyl1_1345 FeS assembly ATPase SufC; SMART: ATPase, AAA+ type, core.
 
  
 0.801
ADZ90997.1
KEGG: mmw:Mmwyl1_1444 AsnC family transcriptional regulator; PFAM: Transcription regulator AsnC-type, C-terminal; SMART: Transcription regulator AsnC-type.
       0.764
ADZ90483.1
FeS assembly protein SufB; KEGG: mmw:Mmwyl1_1344 cysteine desulfurase activator complex subunit SufB; TIGRFAM: SUF system FeS cluster assembly, SufB; PFAM: SUF system FeS cluster assembly, SufBD.
 
 
 0.716
ADZ90485.1
KEGG: mmw:Mmwyl1_1346 FeS assembly protein SufD; TIGRFAM: SUF system FeS cluster assembly, SufD; PFAM: SUF system FeS cluster assembly, SufBD.
 
 
 0.695
ADZ92376.1
PFAM: Endonuclease/exonuclease/phosphatase; KEGG: pat:Patl_0537 endonuclease/exonuclease/phosphatase.
    
   0.677
ADZ90231.1
Amino acid adenylation domain protein; SMART: Polyketide synthase, phosphopantetheine-binding; TIGRFAM: Amino acid adenylation; KEGG: pfs:PFLU3223 putative non-ribosomal peptide synthetase; PFAM: AMP-dependent synthetase/ligase; Condensation domain; Phosphopantetheine-binding.
  
  
 0.608
ADZ90489.1
PFAM: Fe-S metabolism associated SufE; KEGG: mmw:Mmwyl1_1350 Fe-S metabolism associated SufE.
  
 
 0.558
ADZ93387.1
PFAM: Fe-S metabolism associated SufE; KEGG: mmw:Mmwyl1_4451 Fe-S metabolism associated SufE.
  
 
 0.558
ADZ90229.1
PFAM: AMP-dependent synthetase/ligase; Phosphopantetheine-binding; KEGG: ava:Ava_4108 beta-ketoacyl synthase; SMART: Polyketide synthase, phosphopantetheine-binding.
  
  
 0.465
Your Current Organism:
Marinomonas mediterranea
NCBI taxonomy Id: 717774
Other names: M. mediterranea MMB-1, Marinomonas mediterranea MMB-1, Marinomonas mediterranea str. MMB-1, Marinomonas mediterranea strain MMB-1
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