STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ91059.1PFAM: VacJ-like lipoprotein; KEGG: mmw:Mmwyl1_2518 VacJ family lipoprotein. (280 aa)    
Predicted Functional Partners:
ADZ92205.1
PFAM: Porin, Gram-negative type; KEGG: mmw:Mmwyl1_3619 porin.
   
 
 0.833
ADZ91038.1
PFAM: Mammalian cell entry-related; KEGG: mmw:Mmwyl1_2411 hypothetical protein.
 
   
 0.832
ADZ91058.1
TIGRFAM: RNA helicase, ATP-dependent DEAH box, HrpA type; PFAM: Helicase-associated domain; Helicase, C-terminal; Domain of unknown function DUF1605; KEGG: mmw:Mmwyl1_2519 ATP-dependent helicase HrpA; SMART: Helicase-associated domain; DEAD-like helicase, N-terminal; ATPase, AAA+ type, core; Helicase, C-terminal.
 
     0.759
ADZ89726.1
PFAM: Porin, Gram-negative type; KEGG: hse:Hsero_4260 porin precursor transmembrane protein.
   
 
 0.741
ADZ91039.1
PFAM: Toluene tolerance Ttg2; KEGG: mmw:Mmwyl1_2410 toluene tolerance family protein.
 
 
 
 0.716
ADZ91456.1
PFAM: Protein of unknown function DUF1302; KEGG: mmw:Mmwyl1_3147 hypothetical protein.
    
 
 0.691
ADZ91037.1
Protein of unknown function DUF140; KEGG: mmw:Mmwyl1_2412 hypothetical protein; TIGRFAM: Domain of unknown function DUF140; PFAM: Domain of unknown function DUF140.
 
   
 0.506
ADZ91036.1
Fe(3+)-transporting ATPase; PFAM: ABC transporter-like; KEGG: mmw:Mmwyl1_2413 ABC transporter-like protein; SMART: ATPase, AAA+ type, core.
 
   
 0.482
ADZ89718.1
KEGG: mmw:Mmwyl1_4114 glutamate synthase subunit alpha; PFAM: Glutamate synthase, central-C; Glutamine amidotransferase, class-II; Glutamate synthase, central-N; Glutamate synthase, alpha subunit, C-terminal.
       0.467
lptD
Organic solvent tolerance protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane.
 
   
 0.442
Your Current Organism:
Marinomonas mediterranea
NCBI taxonomy Id: 717774
Other names: M. mediterranea MMB-1, Marinomonas mediterranea MMB-1, Marinomonas mediterranea str. MMB-1, Marinomonas mediterranea strain MMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.