STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ91079.1Integrase family protein; PFAM: Integrase, catalytic core, phage; KEGG: ppw:PputW619_4354 integrase family protein; Belongs to the 'phage' integrase family. (388 aa)    
Predicted Functional Partners:
ADZ91075.1
Hypothetical protein; KEGG: ecq:ECED1_2119 putative replication protein from phage (modular protein).
       0.793
ADZ91076.1
Hypothetical protein.
  
    0.784
ADZ91077.1
Hypothetical protein.
       0.773
ADZ91078.1
Hypothetical protein.
       0.773
ADZ91073.1
KEGG: tcx:Tcr_0667 putative bacteriophage protein (GP55-like).
       0.762
ADZ91074.1
KEGG: hdu:HD0105 hypothetical protein.
       0.762
ADZ91072.1
KEGG: nhl:Nhal_0950 hypothetical protein.
  
  
 0.620
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
     
 0.593
ADZ91353.1
Phage transcriptional regulator, AlpA; PFAM: Prophage CP4-57 regulatory; KEGG: svo:SVI_1340 DNA-binding protein.
 
  
 0.590
ADZ90826.1
AraC protein arabinose-binding/dimerization; KEGG: pfo:Pfl01_2320 AraC family transcriptional regulator; PFAM: HTH transcriptional regulator, AraC, arabinose-binding/dimerisation; SMART: Helix-turn-helix, AraC type, DNA binding domain.
  
     0.538
Your Current Organism:
Marinomonas mediterranea
NCBI taxonomy Id: 717774
Other names: M. mediterranea MMB-1, Marinomonas mediterranea MMB-1, Marinomonas mediterranea str. MMB-1, Marinomonas mediterranea strain MMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.