STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ91111.1KEGG: vha:VIBHAR_01998 hypothetical protein. (189 aa)    
Predicted Functional Partners:
ADZ91110.1
PFAM: Phage major tail tube protein; KEGG: vha:VIBHAR_01997 hypothetical protein.
       0.633
ADZ91109.1
KEGG: vha:VIBHAR_01996 hypothetical protein.
       0.624
ADZ91108.1
Hypothetical protein.
       0.601
ADZ91112.1
KEGG: vha:VIBHAR_01999 hypothetical protein; TIGRFAM: Phage tail tape measure protein TP901, core region; PFAM: Phage tail tape measure protein TP901, core region.
       0.469
ADZ91102.1
KEGG: pfo:Pfl01_1140 hypothetical protein.
       0.443
ADZ91103.1
PFAM: Baseplate assembly protein J-like, predicted; KEGG: vha:VIBHAR_01990 hypothetical protein.
       0.443
ADZ91104.1
TIGRFAM: Phage tail protein I; KEGG: pfo:Pfl01_1142 phage tail protein I.
       0.443
ADZ91105.1
KEGG: sbn:Sbal195_2898 hypothetical protein.
       0.443
ADZ91101.1
Hypothetical protein.
       0.437
ADZ91106.1
Hypothetical protein.
       0.437
Your Current Organism:
Marinomonas mediterranea
NCBI taxonomy Id: 717774
Other names: M. mediterranea MMB-1, Marinomonas mediterranea MMB-1, Marinomonas mediterranea str. MMB-1, Marinomonas mediterranea strain MMB-1
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.