STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ91112.1KEGG: vha:VIBHAR_01999 hypothetical protein; TIGRFAM: Phage tail tape measure protein TP901, core region; PFAM: Phage tail tape measure protein TP901, core region. (927 aa)    
Predicted Functional Partners:
ADZ91109.1
KEGG: vha:VIBHAR_01996 hypothetical protein.
 
  
 0.885
ADZ91103.1
PFAM: Baseplate assembly protein J-like, predicted; KEGG: vha:VIBHAR_01990 hypothetical protein.
 
  
 0.857
ADZ91100.1
KEGG: vha:VIBHAR_01988 hypothetical protein; TIGRFAM: Phage-related baseplate assembly protein V; PFAM: Phage baseplate assembly protein V.
 
  
 0.848
ADZ91104.1
TIGRFAM: Phage tail protein I; KEGG: pfo:Pfl01_1142 phage tail protein I.
 
  
 0.845
ADZ91116.1
PFAM: Phage P2 GpU; KEGG: mmw:Mmwyl1_2508 phage P2 GpU family protein.
 
    0.833
ADZ91118.1
PFAM: Phage late control D; KEGG: mmw:Mmwyl1_2506 phage late control D family protein.
 
  
 0.825
ADZ93393.1
PFAM: Phage major tail tube protein; KEGG: wri:WRi_006970 contractile tail tube protein.
 
  
 0.778
ADZ93388.1
PFAM: Phage late control D; KEGG: abu:Abu_1651 phage tail protein D.
 
  
 0.775
ADZ93399.1
PFAM: Baseplate assembly protein J-like, predicted; KEGG: wpi:WPa_0416 baseplate assembly protein GpJ.
 
  
 0.772
ADZ93394.1
KEGG: cjr:CJE0227 major tail sheath protein.
 
  
 0.749
Your Current Organism:
Marinomonas mediterranea
NCBI taxonomy Id: 717774
Other names: M. mediterranea MMB-1, Marinomonas mediterranea MMB-1, Marinomonas mediterranea str. MMB-1, Marinomonas mediterranea strain MMB-1
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