STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ91138.1KEGG: mmw:Mmwyl1_2439 ABC transporter fused inner membrane subunits. (600 aa)    
Predicted Functional Partners:
ADZ91139.1
PFAM: Bacterial extracellular solute-binding, family 1; KEGG: mmw:Mmwyl1_2438 hypothetical protein.
 
  
 0.966
ADZ91137.1
Fe(3+)-transporting ATPase; PFAM: ABC transporter-like; KEGG: mmw:Mmwyl1_2440 ABC transporter-like protein; SMART: ATPase, AAA+ type, core.
 
  
 0.962
ADZ92332.1
PFAM: CDP-alcohol phosphatidyltransferase; KEGG: mmw:Mmwyl1_2999 CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
     0.818
ADZ93056.1
Dihydrolipoyl dehydrogenase; KEGG: mmw:Mmwyl1_0176 SNARE associated Golgi protein; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SNARE associated Golgi protein; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
 
   
 0.624
ADZ93057.1
PFAM: Domain of unknown function DUF547; KEGG: mmw:Mmwyl1_0177 hypothetical protein.
 
     0.445
ADZ91140.1
PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: mmw:Mmwyl1_2437 succinylglutamate desuccinylase/aspartoacylase.
       0.418
ADZ91141.1
PFAM: DNA helicase, UvrD/REP type; KEGG: mmw:Mmwyl1_2436 UvrD/REP helicase.
       0.409
ADZ91142.1
Flavanone 3-dioxygenase; KEGG: mmw:Mmwyl1_2435 2OG-Fe(II) oxygenase; PFAM: Oxoglutarate/iron-dependent oxygenase; Belongs to the iron/ascorbate-dependent oxidoreductase family.
       0.404
Your Current Organism:
Marinomonas mediterranea
NCBI taxonomy Id: 717774
Other names: M. mediterranea MMB-1, Marinomonas mediterranea MMB-1, Marinomonas mediterranea str. MMB-1, Marinomonas mediterranea strain MMB-1
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