STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ91384.1Phosphonate-transporting ATPase; PFAM: ABC transporter-like; KEGG: mmw:Mmwyl1_2208 ABC transporter-like protein; SMART: ATPase, AAA+ type, core. (225 aa)    
Predicted Functional Partners:
ADZ91385.1
PFAM: Domain of unknown function DUF214, ABC transporter permease; KEGG: mmw:Mmwyl1_2209 hypothetical protein.
 
     0.945
ADZ91383.1
Arylesterase; KEGG: mmw:Mmwyl1_2207 arylesterase; PFAM: Lipase, GDSL.
 
     0.886
ADZ91386.1
KEGG: mmw:Mmwyl1_2210 DNA polymerase II; PFAM: DNA-directed DNA polymerase, family B, conserved region; DNA-directed DNA polymerase, family B, exonuclease domain; SMART: DNA-directed DNA polymerase, family B.
       0.773
ADZ93064.1
KEGG: mmw:Mmwyl1_2819 putative nitrate transport protein.
 
      0.703
ADZ91382.1
Glycerate dehydrogenase; KEGG: mmw:Mmwyl1_2206 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain.
 
     0.694
tsaD
O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
  
     0.608
ADZ91381.1
PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; KEGG: mmw:Mmwyl1_2205 pseudouridine synthase.
       0.565
ADZ91380.1
KEGG: hch:HCH_00188 translation initiation factor SUI1; TIGRFAM: Archaeal/bacterial translation initiation factor SUI1; PFAM: Translation initiation factor SUI1.
       0.544
ADZ90082.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: mmw:Mmwyl1_3822 binding-protein-dependent transporter inner membrane component.
 
      0.531
ADZ93348.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: mmw:Mmwyl1_4406 binding-protein-dependent transporter inner membrane component.
 
      0.498
Your Current Organism:
Marinomonas mediterranea
NCBI taxonomy Id: 717774
Other names: M. mediterranea MMB-1, Marinomonas mediterranea MMB-1, Marinomonas mediterranea str. MMB-1, Marinomonas mediterranea strain MMB-1
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