STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ91582.1PFAM: Sugar isomerase (SIS); KEGG: mmw:Mmwyl1_2396 putative phosphoheptose isomerase. (197 aa)    
Predicted Functional Partners:
hldE
Bifunctional protein hldE; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family.
  
 0.992
ADZ89314.1
TIGRFAM: Histidinol-phosphate phosphatase; HAD-superfamily hydrolase, subfamily IIIA; KEGG: mmw:Mmwyl1_0011 histidinol-phosphate phosphatase family protein.
 
  
 0.976
ADZ91581.1
UPF0102 protein yraN; TIGRFAM: Uncharacterised protein family UPF0102; HAMAP: Uncharacterised protein family UPF0102; KEGG: mmw:Mmwyl1_2395 hypothetical protein; PFAM: Uncharacterised protein family UPF0102; Belongs to the UPF0102 family.
  
  
 0.868
ADZ92496.1
Manually curated; TIGRFAM: Lipopolysaccharide heptosyltransferase II; KEGG: mmw:Mmwyl1_3478 lipopolysaccharide heptosyltransferase II; PFAM: Glycosyl transferase, family 9.
 
   
 0.860
ADZ91580.1
PFAM: LppC putative lipoprotein; KEGG: mmw:Mmwyl1_2394 putative lipoprotein-like protein.
  
    0.853
ADZ92068.1
PFAM: Glycosyl transferase, family 9; KEGG: mmw:Mmwyl1_1695 glycosyl transferase family protein.
 
   
 0.825
hldD
ADP-L-glycero-D-manno-heptose-6-epimerase; Catalyzes the interconversion between ADP-D-glycero-beta-D- manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose; Belongs to the NAD(P)-dependent epimerase/dehydratase family. HldD subfamily.
 
  
 0.784
dnaA
Chromosomal replication initiator protein dnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.
    
 
 0.742
ADZ92560.1
PFAM: Nucleotidyl transferase; Cystathionine beta-synthase, core; KEGG: vex:VEA_001798 D-glycero-D-manno-heptose 1-phosphate guanosyltransferase.
  
  
 0.689
rsmI
Protein of unknown function UPF0011; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
       0.667
Your Current Organism:
Marinomonas mediterranea
NCBI taxonomy Id: 717774
Other names: M. mediterranea MMB-1, Marinomonas mediterranea MMB-1, Marinomonas mediterranea str. MMB-1, Marinomonas mediterranea strain MMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.