STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ91583.1PFAM: Glutamine amidotransferase, class-II; KEGG: mmw:Mmwyl1_2527 glutamine amidotransferase class-II. (260 aa)    
Predicted Functional Partners:
ADZ91584.1
SMART: von Willebrand factor, type A; KEGG: mmw:Mmwyl1_2528 von Willebrand factor type A.
       0.820
argB
Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
      0.754
ADZ91585.1
Protein of unknown function UPF0153; PFAM: Uncharacterised protein family UPF0153; KEGG: mmw:Mmwyl1_2529 hypothetical protein; Belongs to the UPF0260 family.
       0.518
ADZ91586.1
UPF0745 protein ycgL; KEGG: mmw:Mmwyl1_2530 hypothetical protein; HAMAP: Uncharacterised protein family UPF0745; PFAM: Uncharacterised protein family UPF0745.
       0.518
rnd
Ribonuclease D; Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides; Belongs to the RNase D family.
       0.503
recR
Recombination protein recR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.
       0.503
ADZ91589.1
UPF0133 protein ybaB; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.
       0.502
ADZ91590.1
TIGRFAM: DNA polymerase III, subunit gamma/ tau; PFAM: ATPase, AAA-type, core; KEGG: mmw:Mmwyl1_2534 DNA polymerase III subunits gamma and tau; SMART: ATPase, AAA+ type, core.
       0.483
Your Current Organism:
Marinomonas mediterranea
NCBI taxonomy Id: 717774
Other names: M. mediterranea MMB-1, Marinomonas mediterranea MMB-1, Marinomonas mediterranea str. MMB-1, Marinomonas mediterranea strain MMB-1
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