STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ91593.1Alcohol dehydrogenase; KEGG: mmw:Mmwyl1_4043 iron-containing alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, iron-type; Cytochrome c oxidase, subunit Va. (386 aa)    
Predicted Functional Partners:
ADZ90473.1
KEGG: mmw:Mmwyl1_0237 alcohol dehydrogenase; PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, C-terminal; SMART: Polyketide synthase, enoylreductase.
 
 
 0.810
ADZ92612.1
TIGRFAM: Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase; PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, C-terminal; KEGG: mmw:Mmwyl1_3680 S-(hydroxymethyl)glutathione dehydrogenase; SMART: Polyketide synthase, enoylreductase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
  
 
 0.794
ADZ93046.1
PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like; KEGG: bbt:BBta_6644 benzyl alcohol dehydrogenase (aryl-alcohol dehydrogenase); SMART: Polyketide synthase, enoylreductase.
  
 
 0.794
ADZ92678.1
PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, C-terminal; KEGG: mmw:Mmwyl1_0234 alcohol dehydrogenase; SMART: Polyketide synthase, enoylreductase.
  
 
 0.785
glgA
Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
   
  
 0.755
ADZ91592.1
TIGRFAM: Methylmalonate-semialdehyde dehydrogenase; KEGG: mmw:Mmwyl1_4044 methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde dehydrogenase domain.
 
 
 0.620
ADZ91594.1
KEGG: mmw:Mmwyl1_4042 choline/carnitine/betaine transporter; TIGRFAM: BCCT transporter; PFAM: BCCT transporter; Belongs to the BCCT transporter (TC 2.A.15) family.
 
  
 0.618
pckA
Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. Belongs to the phosphoenolpyruvate carboxykinase (ATP) family.
   
  
 0.593
ADZ92121.1
Fatty oxidation complex, alpha subunit FadB; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family.
  
 
 0.576
ADZ90231.1
Amino acid adenylation domain protein; SMART: Polyketide synthase, phosphopantetheine-binding; TIGRFAM: Amino acid adenylation; KEGG: pfs:PFLU3223 putative non-ribosomal peptide synthetase; PFAM: AMP-dependent synthetase/ligase; Condensation domain; Phosphopantetheine-binding.
  
  
 0.550
Your Current Organism:
Marinomonas mediterranea
NCBI taxonomy Id: 717774
Other names: M. mediterranea MMB-1, Marinomonas mediterranea MMB-1, Marinomonas mediterranea str. MMB-1, Marinomonas mediterranea strain MMB-1
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