STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ91626.1PFAM: KAP P-loop; KEGG: mmw:Mmwyl1_3848 KAP P-loop domain-containing protein. (915 aa)    
Predicted Functional Partners:
ADZ91625.1
KEGG: vcj:VCD_000692 D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain.
       0.773
ADZ92487.1
Phage shock protein A, PspA; PFAM: PspA/IM30; KEGG: ttu:TERTU_4217 putative phage shock protein A.
  
     0.542
ADZ90335.1
Pectate lyase; KEGG: eca:ECA2112 type III effector protein; PFAM: Pectate lyase, catalytic.
  
     0.482
ADZ89354.1
PFAM: Transglutaminase-like; KEGG: hch:HCH_06920 hypothetical protein.
  
     0.466
ADZ92082.1
Pseudolysin; PFAM: Peptidase M4, thermolysin C-terminal; Peptidase M4, thermolysin; PKD domain; KEGG: hch:HCH_04180 zinc metalloprotease (elastase); SMART: PKD/Chitinase domain.
  
     0.450
ADZ90627.1
Esterase; PFAM: Putative esterase; KEGG: cvi:CV_2231 enterobactin/ferric enterobactin esterase.
  
     0.438
ADZ90705.1
PFAM: Protein of unknown function DUF748; KEGG: mmw:Mmwyl1_1529 hypothetical protein.
  
     0.437
ADZ91584.1
SMART: von Willebrand factor, type A; KEGG: mmw:Mmwyl1_2528 von Willebrand factor type A.
  
     0.432
ADZ92114.1
PFAM: Glycoside hydrolase, family 79, N-terminal; KEGG: mmw:Mmwyl1_1639 hypothetical protein.
  
     0.426
ADZ91275.1
Histidine kinase; PFAM: ATPase-like, ATP-binding domain; KEGG: hch:HCH_04306 signal transduction histidine kinase.
  
     0.410
Your Current Organism:
Marinomonas mediterranea
NCBI taxonomy Id: 717774
Other names: M. mediterranea MMB-1, Marinomonas mediterranea MMB-1, Marinomonas mediterranea str. MMB-1, Marinomonas mediterranea strain MMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.