STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ91645.1KEGG: mmw:Mmwyl1_2673 TRAP transporter, 4TM/12TM fusion protein; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit. (656 aa)    
Predicted Functional Partners:
ADZ91644.1
TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: mmw:Mmwyl1_2672 TRAP transporter solute receptor TAXI family protein.
 
    0.933
ADZ92714.1
TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: sil:SPO2187 TRAP transporter solute receptor TAXI family protein.
    0.877
ADZ90562.1
TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: mmw:Mmwyl1_1764 TRAP transporter solute receptor TAXI family protein.
    0.865
ADZ92339.1
TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: mmw:Mmwyl1_3009 TRAP transporter solute receptor TAXI family protein.
    0.844
ADZ91646.1
TIGRFAM: Maleylacetoacetate isomerase; KEGG: mmw:Mmwyl1_2674 maleylacetoacetate isomerase; PFAM: Glutathione S-transferase, N-terminal; Glutathione S-transferase, C-terminal.
       0.718
ADZ91643.1
PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: mmw:Mmwyl1_2671 Rieske (2Fe-2S) domain-containing protein.
       0.448
Your Current Organism:
Marinomonas mediterranea
NCBI taxonomy Id: 717774
Other names: M. mediterranea MMB-1, Marinomonas mediterranea MMB-1, Marinomonas mediterranea str. MMB-1, Marinomonas mediterranea strain MMB-1
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