STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ91687.1KEGG: mmw:Mmwyl1_3068 succinylglutamate desuccinylase/aspartoacylase. (331 aa)    
Predicted Functional Partners:
ADZ91688.1
PFAM: FAD dependent oxidoreductase; KEGG: mmw:Mmwyl1_3069 FAD dependent oxidoreductase.
       0.773
ADZ90797.1
PFAM: GtrA-like protein; KEGG: mmw:Mmwyl1_2658 GtrA family protein.
  
     0.545
ADZ91686.1
Hypothetical protein.
       0.539
astD
N-succinylglutamate 5-semialdehyde dehydrogenase; Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate.
 
   
  0.499
ADZ90085.1
PFAM: Peptidase M20; Peptidase M20, dimerisation; KEGG: mmw:Mmwyl1_3819 hypothetical protein.
 
     0.452
ADZ92838.1
2-dehydropantoate 2-reductase; TIGRFAM: Ketopantoate reductase ApbA/PanE; KEGG: mmw:Mmwyl1_1818 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE, N-terminal; Ketopantoate reductase ApbA/PanE, C-terminal.
  
   
 0.429
ADZ93108.1
SMP-30/Gluconolaconase/LRE-like region-containing protein; PFAM: SMP-30/Gluconolaconase/LRE-like region; KEGG: pfs:PFLU3458 putative gluconolactonase.
  
     0.400
Your Current Organism:
Marinomonas mediterranea
NCBI taxonomy Id: 717774
Other names: M. mediterranea MMB-1, Marinomonas mediterranea MMB-1, Marinomonas mediterranea str. MMB-1, Marinomonas mediterranea strain MMB-1
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