STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ91865.1KEGG: vvy:VVA0231 taurine catabolism dioxygenase; PFAM: Taurine catabolism dioxygenase TauD/TfdA. (277 aa)    
Predicted Functional Partners:
ADZ90960.1
Phosphoadenylyl-sulfate reductase (thioredoxin); KEGG: prw:PsycPRwf_1108 phosphoadenosine phosphosulfate reductase; PFAM: Phosphoadenosine phosphosulphate reductase.
     
 0.902
ADZ91556.1
KEGG: mmw:Mmwyl1_2345 sulfite reductase; PFAM: Nitrite/sulphite reductase 4Fe-4S domain; Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like.
     
 0.902
ADZ90290.1
Rhodanese-like protein; Catalyzes, although with low efficiency, the sulfur transfer reaction from thiosulfate to cyanide.
     
 0.901
ADZ92503.1
3-mercaptopyruvate sulfurtransferase; PFAM: Rhodanese-like; KEGG: mmw:Mmwyl1_3485 rhodanese domain-containing protein; SMART: Rhodanese-like.
     
  0.900
ADZ92785.1
Gamma-glutamyltransferase; TIGRFAM: Gamma-glutamyltranspeptidase; KEGG: vha:VIBHAR_00348 gamma-glutamyltransferase; PFAM: Gamma-glutamyltranspeptidase.
     
  0.900
ADZ90231.1
Amino acid adenylation domain protein; SMART: Polyketide synthase, phosphopantetheine-binding; TIGRFAM: Amino acid adenylation; KEGG: pfs:PFLU3223 putative non-ribosomal peptide synthetase; PFAM: AMP-dependent synthetase/ligase; Condensation domain; Phosphopantetheine-binding.
 
  
 0.847
ADZ90229.1
PFAM: AMP-dependent synthetase/ligase; Phosphopantetheine-binding; KEGG: ava:Ava_4108 beta-ketoacyl synthase; SMART: Polyketide synthase, phosphopantetheine-binding.
 
  
 0.795
ADZ90233.1
Amino acid adenylation domain protein; SMART: Polyketide synthase, phosphopantetheine-binding; TIGRFAM: Amino acid adenylation; KEGG: nde:NIDE2162 putative multi-domain non-ribosomal peptide synthetase; PFAM: AMP-dependent synthetase/ligase; Phosphopantetheine-binding.
 
  
 0.658
ADZ90134.1
KEGG: fri:FraEuI1c_3327 hypothetical protein.
  
     0.616
ADZ91866.1
KEGG: sme:SMa1652 hydantoin racemase; PFAM: Asp/Glu/hydantoin racemase.
 
     0.602
Your Current Organism:
Marinomonas mediterranea
NCBI taxonomy Id: 717774
Other names: M. mediterranea MMB-1, Marinomonas mediterranea MMB-1, Marinomonas mediterranea str. MMB-1, Marinomonas mediterranea strain MMB-1
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