STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ91866.1KEGG: sme:SMa1652 hydantoin racemase; PFAM: Asp/Glu/hydantoin racemase. (233 aa)    
Predicted Functional Partners:
ADZ89456.1
TIGRFAM: Putative urate catabolism protein; KEGG: mmw:Mmwyl1_0469 chitin deacetylase; PFAM: Polysaccharide deacetylase.
 
  
  0.962
ADZ93014.1
OHCU decarboxylase; KEGG: mmw:Mmwyl1_2708 hypothetical protein; TIGRFAM: 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 1; PFAM: Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase.
    
  0.908
ADZ91867.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: avi:Avi_6275 ABC transporter membrane spanning protein (spermidine/putrescine).
 
     0.874
ADZ91868.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: tau:Tola_1963 binding-protein-dependent transport systems inner membrane component.
 
     0.855
ADZ91869.1
KEGG: azl:AZL_b05090 spermidine/putrescine transport system substrate-binding protein.
 
     0.839
ADZ91871.1
KEGG: pmy:Pmen_3833 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR.
 
     0.753
ADZ91865.1
KEGG: vvy:VVA0231 taurine catabolism dioxygenase; PFAM: Taurine catabolism dioxygenase TauD/TfdA.
 
     0.602
ADZ91870.1
Polyamine-transporting ATPase; PFAM: ABC transporter-like; KEGG: tau:Tola_1961 ABC transporter related; SMART: ATPase, AAA+ type, core.
 
     0.549
Your Current Organism:
Marinomonas mediterranea
NCBI taxonomy Id: 717774
Other names: M. mediterranea MMB-1, Marinomonas mediterranea MMB-1, Marinomonas mediterranea str. MMB-1, Marinomonas mediterranea strain MMB-1
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