Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADZ92419.1Heme exporter protein CcmB; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmB/CycW/HelB family. (220 aa)    
Predicted Functional Partners:
ccmC
Heme exporter protein CcmC; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family.
 
 0.999
ccmA
Heme exporter protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family.
 0.999
ADZ92417.1
KEGG: mmw:Mmwyl1_3410 cytochrome c-type biogenesis protein CcmF; TIGRFAM: Cytochrome c-type biogenesis protein CcmF; PFAM: Cytochrome c assembly protein.
 
  
 0.903
ADZ92416.1
KEGG: mmw:Mmwyl1_3409 periplasmic protein thiol--disulphide oxidoreductase DsbE; TIGRFAM: Periplasmic protein thiol:disulphide oxidoreductase DsbE; PFAM: Redoxin.
 
  
 0.876
ADZ92415.1
Cytochrome C biogenesis protein; Possible subunit of a heme lyase.
 
   
 0.853
ADZ92414.1
PFAM: Tetratricopeptide TPR2; KEGG: mmw:Mmwyl1_3407 TPR repeat-containing protein.
 
   
 0.619
ADZ92421.1
KEGG: mmw:Mmwyl1_3416 hypothetical protein.
       0.608
ADZ92422.1
PFAM: Type III secretion exporter; KEGG: mmw:Mmwyl1_3417 hypothetical protein.
       0.608
fur
Ferric uptake regulator, Fur family; PFAM: Ferric-uptake regulator; KEGG: mmw:Mmwyl1_3967 ferric uptake regulator family protein; Belongs to the Fur family.
     
 0.571
zipA
Cell division protein zipA-like protein; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins.
 
   
 0.475
Your Current Organism:
Marinomonas mediterranea
NCBI taxonomy Id: 717774
Other names: M. mediterranea MMB-1, Marinomonas mediterranea MMB-1, Marinomonas mediterranea str. MMB-1, Marinomonas mediterranea strain MMB-1
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