STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ92535.1PFAM: Auxin efflux carrier; KEGG: mmw:Mmwyl1_3536 auxin efflux carrier. (312 aa)    
Predicted Functional Partners:
ADZ92940.1
Malic protein NAD-binding protein; KEGG: mmw:Mmwyl1_4123 malate dehydrogenase; PFAM: Malic enzyme, NAD-binding; Malic enzyme, N-terminal; SMART: Malic enzyme, NAD-binding.
  
  
 0.632
ADZ92536.1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: mmw:Mmwyl1_3537 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
       0.576
ADZ92537.1
Pirin domain protein; PFAM: Pirin, N-terminal; KEGG: mmw:Mmwyl1_3538 pirin domain-containing protein; Belongs to the pirin family.
       0.401
Your Current Organism:
Marinomonas mediterranea
NCBI taxonomy Id: 717774
Other names: M. mediterranea MMB-1, Marinomonas mediterranea MMB-1, Marinomonas mediterranea str. MMB-1, Marinomonas mediterranea strain MMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.