STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ92663.1TIGRFAM: Arginine N-succinyltransferase AstA; Arginine N-succinyltransferase Ast/AOST; KEGG: mmw:Mmwyl1_3669 arginine N-succinyltransferase; PFAM: Arginine N-succinyltransferase Ast/AOST. (347 aa)    
Predicted Functional Partners:
astB
N-succinylarginine dihydrolase; Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)- succinylornithine, ammonia and CO(2).
 
 
 0.997
ADZ92662.1
Arginine/ornithine succinyltransferase subunit; TIGRFAM: Arginine N-succinyltransferase Ast/AOST; KEGG: mmw:Mmwyl1_3668 arginine N-succinyltransferase; PFAM: Arginine N-succinyltransferase Ast/AOST.
 
  
 
0.967
astD
N-succinylglutamate 5-semialdehyde dehydrogenase; Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate.
  
 0.941
astE
Succinylglutamate desuccinylase; Transforms N(2)-succinylglutamate into succinate and glutamate; Belongs to the AspA/AstE family. Succinylglutamate desuccinylase subfamily.
 
  
 0.928
ADZ90751.1
Arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine. Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily.
     
  0.900
argD
PFAM: Aminotransferase class-III; TIGRFAM: Succinylornithine transaminase family; Acetylornithine/succinylornithine aminotransferase; HAMAP: Acetylornithine/succinyldiaminopimelate aminotransferase; KEGG: mmw:Mmwyl1_1109 acetylornithine and succinylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.
 
  
 0.805
argH
PFAM: Lyase 1, N-terminal; TIGRFAM: Argininosuccinate lyase; HAMAP: Argininosuccinate lyase; KEGG: mmw:Mmwyl1_3590 argininosuccinate lyase.
     
 0.804
ADZ92758.1
KEGG: mmw:Mmwyl1_0718 hypothetical protein.
 
     0.425
ADZ92601.1
PFAM: Bacterial NAD-glutamate dehydrogenase; KEGG: mmw:Mmwyl1_1110 NAD-glutamate dehydrogenase.
 
  
 0.404
Your Current Organism:
Marinomonas mediterranea
NCBI taxonomy Id: 717774
Other names: M. mediterranea MMB-1, Marinomonas mediterranea MMB-1, Marinomonas mediterranea str. MMB-1, Marinomonas mediterranea strain MMB-1
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