STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ92881.1KEGG: hha:Hhal_0159 hypothetical protein; TIGRFAM: Type VI secretion system effector, Hcp1; PFAM: Virulence factor, secretion apparatus. (161 aa)    
Predicted Functional Partners:
ADZ92882.1
Type VI secretion protein, EvpB/VC_A0108 family; KEGG: hha:Hhal_0160 hypothetical protein; TIGRFAM: Protein of unknown function DUF877; PFAM: Protein of unknown function DUF877.
 
 0.974
ADZ92883.1
Type VI secretion protein, VC_A0107 family; KEGG: pca:Pcar_2814 hypothetical protein; TIGRFAM: Uncharacterised conserved protein UCP028301; PFAM: Uncharacterised conserved protein UCP028301.
 
 
 0.966
ADZ92876.1
TIGRFAM: Rhs element Vgr protein; KEGG: pca:Pcar_2821 rhs element protein VgrE.
 
  
 0.936
ADZ92880.1
KEGG: pca:Pcar_2817 hypothetical protein; TIGRFAM: Type VI secretion system, lysozyme-related; PFAM: GPW/gp25.
 
  
 0.915
ADZ92878.1
Type VI secretion protein, VC_A0111 family; TIGRFAM: Protein of unknown function DUF1305; KEGG: pca:Pcar_2819 hypothetical protein.
 
  
 0.906
ADZ90055.1
Protein of unknown function DUF796; PFAM: Virulence factor, secretion apparatus; KEGG: vsp:VS_1333 hypothetical protein.
     
  0.900
ADZ92879.1
KEGG: pca:Pcar_2818 hypothetical protein; TIGRFAM: Type VI secretion system, VCA0110; PFAM: Type VI secretion system, VCA0110.
 
  
 0.900
ADZ92884.1
ImpA domain protein; PFAM: ImpA, N-terminal; KEGG: pca:Pcar_2813 hypothetical protein.
 
  
 0.883
ADZ90056.1
Type VI secretion protein, VC_A0107 family; KEGG: vsp:VS_1332 hypothetical protein; TIGRFAM: Uncharacterised conserved protein UCP028301; PFAM: Uncharacterised conserved protein UCP028301.
 
 
 0.882
ADZ90058.1
PFAM: Protein of unknown function DUF877; KEGG: vsp:VS_1330 hypothetical protein.
 
 0.878
Your Current Organism:
Marinomonas mediterranea
NCBI taxonomy Id: 717774
Other names: M. mediterranea MMB-1, Marinomonas mediterranea MMB-1, Marinomonas mediterranea str. MMB-1, Marinomonas mediterranea strain MMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.