STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ92956.1TIR protein; SMART: Toll-Interleukin receptor; KEGG: lby:Lbys_0435 tir protein. (259 aa)    
Predicted Functional Partners:
ADZ92955.1
KEGG: cja:CJA_0147 hypothetical protein.
       0.596
ADZ92957.1
Hypothetical protein.
       0.548
ADZ92954.1
KEGG: afe:Lferr_0291 hypothetical protein.
       0.515
ADZ91149.1
Protein of unknown function DUF6 transmembrane; PFAM: Drug/metabolite transporter; KEGG: mmw:Mmwyl1_0169 hypothetical protein.
  
     0.415
Your Current Organism:
Marinomonas mediterranea
NCBI taxonomy Id: 717774
Other names: M. mediterranea MMB-1, Marinomonas mediterranea MMB-1, Marinomonas mediterranea str. MMB-1, Marinomonas mediterranea strain MMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.