STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ92980.1KEGG: mmw:Mmwyl1_0369 helix-turn-helix type 11 domain-containing protein. (231 aa)    
Predicted Functional Partners:
ADZ89709.1
PFAM: Glutathione S-transferase, N-terminal; Glutathione S-transferase, C-terminal; KEGG: scl:sce7734 glutathione S-transferase.
     0.876
ADZ92983.1
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: pay:PAU_02165 hypothetical protein.
     0.800
ADZ92979.1
KEGG: mmw:Mmwyl1_0106 hypothetical protein.
       0.768
ADZ92982.1
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: cvi:CV_2341 hypothetical protein.
 
     0.699
ADZ90127.1
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: swd:Swoo_1191 hypothetical protein.
 
    0.662
ADZ90128.1
KEGG: swd:Swoo_1190 AraC family transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain.
  
    0.565
ADZ92978.1
3-phytase; KEGG: cse:Cseg_2337 3-phytase; PFAM: Phytase.
       0.440
ADZ90988.1
PFAM: NAD-dependent epimerase/dehydratase; KEGG: ddc:Dd586_2513 NmrA family protein.
  
     0.419
ADZ93140.1
KEGG: sde:Sde_1505 AraC family transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain.
  
     0.416
ADZ93324.1
Transcriptional regulator, AraC family; KEGG: mmw:Mmwyl1_4381 transcription activator effector-binding; PFAM: Bacterial transcription activator, effector binding; HTH transcriptional regulator, AraC; SMART: Bacterial transcription activator, effector binding; Helix-turn-helix, AraC type, DNA binding domain.
 
     0.406
Your Current Organism:
Marinomonas mediterranea
NCBI taxonomy Id: 717774
Other names: M. mediterranea MMB-1, Marinomonas mediterranea MMB-1, Marinomonas mediterranea str. MMB-1, Marinomonas mediterranea strain MMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.