STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ93300.1KEGG: mmw:Mmwyl1_0295 hypothetical protein. (528 aa)    
Predicted Functional Partners:
ADZ93310.1
Flp pilus assembly protein CpaB; KEGG: mmw:Mmwyl1_0305 SAF domain-containing protein; TIGRFAM: Pilus assembly, Flp-type CpaB; PFAM: SAF domain.
  
  
 0.735
ADZ93313.1
PFAM: Signal transduction response regulator, receiver domain; KEGG: mmw:Mmwyl1_0308 response regulator receiver protein.
  
  
 0.733
ADZ90373.1
Stage II sporulation protein E; KEGG: mmw:Mmwyl1_3297 response regulator receiver protein; PFAM: Sporulation stage II, protein E C-terminal; SMART: Protein phosphatase 2C-like.
  
    0.697
ADZ91405.1
KEGG: mmw:Mmwyl1_2226 response regulator receiver protein; PFAM: Sporulation stage II, protein E C-terminal; Signal transduction response regulator, receiver domain; SMART: Protein phosphatase 2C-like; Signal transduction response regulator, receiver domain.
   
    0.695
ADZ93315.1
PFAM: Type II secretion system F domain; KEGG: mmw:Mmwyl1_0310 type II secretion system protein.
  
  
 0.650
ADZ93301.1
Ig family protein; PFAM: Putative Ig; KEGG: mmw:Mmwyl1_0296 Ig family protein.
       0.639
ADZ90009.1
KEGG: vfi:VF_A1024 two-component response regulator, sigma factor PP2C-like phosphatase; PFAM: Signal transduction response regulator, receiver domain; Sporulation stage II, protein E C-terminal; SMART: Signal transduction response regulator, receiver domain; Protein phosphatase 2C-like.
   
    0.592
ADZ93305.1
PFAM: Peptidase M50; KEGG: mmw:Mmwyl1_0300 hypothetical protein.
     
 0.587
ADZ93304.1
PFAM: Secretion protein HlyD; KEGG: mmw:Mmwyl1_0299 hypothetical protein.
       0.579
ADZ93302.1
PFAM: Outer membrane efflux protein; KEGG: mmw:Mmwyl1_0297 outer membrane efflux protein.
  
    0.578
Your Current Organism:
Marinomonas mediterranea
NCBI taxonomy Id: 717774
Other names: M. mediterranea MMB-1, Marinomonas mediterranea MMB-1, Marinomonas mediterranea str. MMB-1, Marinomonas mediterranea strain MMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.