STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ93387.1PFAM: Fe-S metabolism associated SufE; KEGG: mmw:Mmwyl1_4451 Fe-S metabolism associated SufE. (134 aa)    
Predicted Functional Partners:
ADZ93386.1
Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 
 
 0.909
ADZ90483.1
FeS assembly protein SufB; KEGG: mmw:Mmwyl1_1344 cysteine desulfurase activator complex subunit SufB; TIGRFAM: SUF system FeS cluster assembly, SufB; PFAM: SUF system FeS cluster assembly, SufBD.
 
 
 0.782
ADZ93384.1
Cysteine desulfurase; KEGG: mmw:Mmwyl1_1436 class V aminotransferase; PFAM: Aminotransferase, class V/Cysteine desulfurase.
 
 
 0.727
ADZ90486.1
Cysteine desulfurase, SufS subfamily; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 
 
 0.726
ADZ90484.1
TIGRFAM: ATPase SufC, SUF system FeS cluster assembly; PFAM: ABC transporter-like; KEGG: mmw:Mmwyl1_1345 FeS assembly ATPase SufC; SMART: ATPase, AAA+ type, core.
 
 
 0.712
ADZ90485.1
KEGG: mmw:Mmwyl1_1346 FeS assembly protein SufD; TIGRFAM: SUF system FeS cluster assembly, SufD; PFAM: SUF system FeS cluster assembly, SufBD.
 
 
 0.707
ADZ90998.1
Cysteine desulfurase; KEGG: mmw:Mmwyl1_1443 class V aminotransferase; PFAM: Aminotransferase, class V/Cysteine desulfurase.
  
 
 0.558
ADZ92722.1
Kynureninase; KEGG: pha:PSHAa0055 pyridoxal phosphate dependent enzyme; PFAM: Aminotransferase, class V/Cysteine desulfurase.
  
 
 0.507
thiI
tRNA sulfurtransferase; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS.
 
  
 0.500
ADZ90894.1
PFAM: Nucleoid-associated protein NdpA; KEGG: mmw:Mmwyl1_2543 37kDa nucleoid-associated protein.
  
     0.450
Your Current Organism:
Marinomonas mediterranea
NCBI taxonomy Id: 717774
Other names: M. mediterranea MMB-1, Marinomonas mediterranea MMB-1, Marinomonas mediterranea str. MMB-1, Marinomonas mediterranea strain MMB-1
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