STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ93397.1Hypothetical protein. (169 aa)    
Predicted Functional Partners:
ADZ93399.1
PFAM: Baseplate assembly protein J-like, predicted; KEGG: wpi:WPa_0416 baseplate assembly protein GpJ.
       0.787
ADZ93400.1
GPW/gp25 family protein; PFAM: GPW/gp25; KEGG: cjr:CJE0234 baseplate assembly protein W, putative.
       0.776
ADZ93395.1
Hypothetical protein.
       0.773
ADZ93396.1
Hypothetical protein.
       0.773
ADZ93398.1
TIGRFAM: Phage tail protein I; KEGG: cjr:CJE0232 phage tail protein, putative.
       0.773
ADZ93401.1
KEGG: abu:Abu_1664 baseplate assembly protein V, putative; TIGRFAM: Phage-related baseplate assembly protein V; PFAM: Phage baseplate assembly protein V.
       0.773
ADZ93393.1
PFAM: Phage major tail tube protein; KEGG: wri:WRi_006970 contractile tail tube protein.
       0.757
ADZ93394.1
KEGG: cjr:CJE0227 major tail sheath protein.
       0.757
ADZ93402.1
KEGG: vsp:VS_1436 hypothetical protein.
       0.503
ADZ93403.1
Hypothetical protein.
       0.503
Your Current Organism:
Marinomonas mediterranea
NCBI taxonomy Id: 717774
Other names: M. mediterranea MMB-1, Marinomonas mediterranea MMB-1, Marinomonas mediterranea str. MMB-1, Marinomonas mediterranea strain MMB-1
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