STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2B396Uncharacterized protein. (445 aa)    
Predicted Functional Partners:
SUS1
Transcription and mRNA export factor SUS1; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. At the promoters, SAGA is required for recruitment of the basal transcription machinery. It influences RNA polymerase II transcriptional activity through different activities such as TBP interaction and promoter selectivity, interaction with transcription activators, and chromatin modification through histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex required for deubiquitination of [...]
    
 0.569
A0A1Y2B9Y1
SCA7, zinc-binding domain-domain-containing protein.
    
 0.539
A0A1Y2AVJ7
Putative histone acetyltransferase; Belongs to the PI3/PI4-kinase family.
    
 0.506
A0A1Y2AIV7
Transcription initiation factor IID, 18kD subunit-domain-containing protein.
    
  0.490
A0A1Y2AXB6
UNC-like C-terminal-domain-containing protein.
    
 0.478
A0A1Y2B686
Histone acetyltransferases subunit 3-domain-containing protein.
    
 0.462
A0A1Y2B4A0
Uridine kinase family-domain-containing protein.
    
 0.455
A0A1Y2BJD3
Uracil phosphoribosyltransferase-domain-containing protein.
    
 0.455
A0A1Y2BJX4
Putative uracil phosphoribosyltransferase 1.
    
 0.455
A0A1Y2AQI1
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]
    
  0.447
Your Current Organism:
Naematelia encephala
NCBI taxonomy Id: 71784
Other names: CBS 8207, N. encephala, Tremella encephala
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