STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AL1_02090Hypothetical protein. (164 aa)    
Predicted Functional Partners:
AL1_02100
Protein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
 
     0.869
AL1_23230
Hypothetical protein.
  
     0.612
AL1_15240
Hypothetical protein.
  
     0.556
AL1_11020
Hypothetical protein.
  
     0.551
AL1_00770
TonB family C-terminal domain.
  
     0.541
AL1_26360
Metal-dependent hydrolase.
  
     0.533
AL1_30150
Uncharacterized conserved protein.
  
     0.532
AL1_30390
Hypothetical protein.
  
     0.510
AL1_03960
Hypothetical protein.
  
     0.473
AL1_14280
Hypothetical protein.
  
     0.472
Your Current Organism:
Alistipes shahii
NCBI taxonomy Id: 717959
Other names: A. shahii WAL 8301, Alistipes shahii WAL 8301, Alistipes shahii str. WAL 8301, Alistipes shahii strain WAL 8301, Alistipes sp. WAL 8301
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.