Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AL1_19740ABC-type Fe3+-siderophore transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (326 aa)    
Predicted Functional Partners:
AL1_19730
ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components.
 
 
 0.981
AL1_19750
ABC-type Fe3+-hydroxamate transport system, periplasmic component.
 
 
 0.974
AL1_22610
ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components.
 
 
 0.921
AL1_06220
ABC-type Fe3+-hydroxamate transport system, periplasmic component.
 
 
 0.894
AL1_19720
Predicted metal-binding protein.
       0.785
AL1_03120
ABC-type branched-chain amino acid transport systems, ATPase component.
  
 
 0.679
AL1_04890
Ferrous iron transporter FeoB; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.
  
 
 0.454
Your Current Organism:
Alistipes shahii
NCBI taxonomy Id: 717959
Other names: A. shahii WAL 8301, Alistipes shahii WAL 8301, Alistipes shahii str. WAL 8301, Alistipes shahii strain WAL 8301, Alistipes sp. WAL 8301
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